Package: MRFcov 1.0.39

MRFcov: Markov Random Fields with Additional Covariates

Approximate node interaction parameters of Markov Random Fields graphical networks. Models can incorporate additional covariates, allowing users to estimate how interactions between nodes in the graph are predicted to change across covariate gradients. The general methods implemented in this package are described in Clark et al. (2018) <doi:10.1002/ecy.2221>.

Authors:Nicholas J Clark [aut, cre], Konstans Wells [aut], Oscar Lindberg [aut]

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NEWS

# Install 'MRFcov' in R:
install.packages('MRFcov', repos = c('https://nicholasjclark.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/nicholasjclark/mrfcov/issues

Datasets:

On CRAN:

conditional-random-fieldsgraphical-modelsmachine-learningmarkov-random-fieldmultivariate-analysismultivariate-statisticsnetwork-analysisnetworks

11 exports 23 stars 2.20 score 81 dependencies 28 scripts 371 downloads

Last updated 6 months agofrom:91d77124c0. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 24 2024
R-4.5-winOKAug 24 2024
R-4.5-linuxOKAug 24 2024
R-4.4-winOKAug 24 2024
R-4.4-macOKAug 24 2024
R-4.3-winOKAug 24 2024
R-4.3-macOKAug 24 2024

Exports:bootstrap_MRFcv_MRF_diagcv_MRF_diag_repcv_MRF_diag_rep_spatialMRFcovMRFcov_spatialplotMRF_hmpredict_MRFpredict_MRFnetworksprep_MRF_covariatesprep_MRF_covariates_spatial

Dependencies:caretclasscliclockcodetoolscolorspacecpp11data.tablediagramdigestdplyre1071fansifarverforeachfuturefuture.applygenericsggplot2glmnetglobalsgluegowergridExtragtablehardhatigraphipredisobanditeratorsKernSmoothlabelinglatticelavalifecyclelistenvlubridatemagrittrMASSMatrixmgcvModelMetricsmunsellnlmennetnumDerivparallellypbapplypillarpkgconfigplyrpROCprodlimprogressrproxypurrrR6RColorBrewerRcppRcppEigenrecipesreshape2rlangrpartscalessfsmiscshapeSQUAREMstringistringrsurvivaltibbletidyrtidyselecttimechangetimeDatetzdbutf8vctrsviridisLitewithr

Gaussian and Poisson CRFs

Rendered fromGaussian_Poisson_CRFs.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2023-01-12
Started: 2018-08-27

MRFs and CRFs for Bird.parasites data

Rendered fromBird_Parasite_CRF.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2023-04-04
Started: 2018-03-04

Prepping datasets for CRF models

Rendered fromCRF_data_prep.Rmdusingknitr::rmarkdownon Aug 24 2024.

Last update: 2023-01-12
Started: 2018-03-04