Package: mvgam 1.1.3
mvgam: Multivariate (Dynamic) Generalized Additive Models
Fit Bayesian Dynamic Generalized Additive Models to sets of time series. Users can build dynamic nonlinear State-Space models that can incorporate semiparametric effects in observation and process components, using a wide range of observation families. Estimation is performed using Markov Chain Monte Carlo with Hamiltonian Monte Carlo in the software 'Stan'. References: Clark & Wells (2022) <doi:10.1111/2041-210X.13974>.
Authors:
mvgam_1.1.3.tar.gz
mvgam_1.1.3.zip(r-4.5)mvgam_1.1.3.zip(r-4.4)mvgam_1.1.3.zip(r-4.3)
mvgam_1.1.3.tgz(r-4.4-x86_64)mvgam_1.1.3.tgz(r-4.4-arm64)mvgam_1.1.3.tgz(r-4.3-x86_64)mvgam_1.1.3.tgz(r-4.3-arm64)
mvgam_1.1.3.tar.gz(r-4.5-noble)mvgam_1.1.3.tar.gz(r-4.4-noble)
mvgam_1.1.3.tgz(r-4.4-emscripten)mvgam_1.1.3.tgz(r-4.3-emscripten)
mvgam.pdf |mvgam.html✨
mvgam/json (API)
NEWS
# Install 'mvgam' in R: |
install.packages('mvgam', repos = c('https://nicholasjclark.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/nicholasjclark/mvgam/issues
- all_neon_tick_data - NEON Amblyomma and Ixodes tick abundance survey data
- portal_data - Portal Project rodent capture survey data
bayesian-statisticsdynamic-factor-modelsecological-modellingforecastinggaussian-processgeneralised-additive-modelsgeneralized-additive-modelsjagsmultilevel-modelsmultivariate-timeseriesstantime-series-analysistimeseriesvector-autoregressionvectorautoregression
Last updated 2 hours agofrom:2d0b304657. Checks:OK: 9. Indexed: yes.
Target | Result | Date |
---|---|---|
Doc / Vignettes | OK | Sep 18 2024 |
R-4.5-win-x86_64 | OK | Sep 18 2024 |
R-4.5-linux-x86_64 | OK | Sep 18 2024 |
R-4.4-win-x86_64 | OK | Sep 18 2024 |
R-4.4-mac-x86_64 | OK | Sep 18 2024 |
R-4.4-mac-aarch64 | OK | Sep 18 2024 |
R-4.3-win-x86_64 | OK | Sep 18 2024 |
R-4.3-mac-x86_64 | OK | Sep 18 2024 |
R-4.3-mac-aarch64 | OK | Sep 18 2024 |
Exports:%>%add_residualsARbernoullibeta_binomialbetarCARcodecompare_mvgamscomparisonsconditional_effectsdatagriddrawDotmvgamdynamicensembleeval_mvgameval_smoothDothilbertDotsmootheval_smoothDotmodDotsmootheval_smoothDotmoiDotsmoothfevdforecastget_mvgam_priorsgpGPhindcasthypothesesirflfo_cvlognormallooloo_comparelv_correlationsmcmc_plotmvgamnbneff_rationmixnuts_paramsplot_comparisonsplot_mvgam_factorsplot_mvgam_fcplot_mvgam_ptermsplot_mvgam_randomeffectsplot_mvgam_residsplot_mvgam_seriesplot_mvgam_smoothplot_mvgam_trendplot_mvgam_uncertaintyplot_predictionsplot_slopesposterior_epredposterior_linpredposterior_predictpp_checkppcpredictionspriorprior_prior_stringPWrhatroll_eval_mvgamRWsscoreseries_to_mvgamset_priorsim_mvgamslopesstabilitystancodestandatastudentstudent_tt2tetitweedieVARvariables
Dependencies:abindaskpassbackportsbayesplotBHbridgesamplingbrmsBrobdingnagcallrcheckmateclicodacodetoolscolorspacecurldata.tabledescdigestdistributionaldplyrfansifarverfuturefuture.applygenericsggplot2ggridgesglobalsgluegreyboxgridExtragtablehttrinlineinsightisobandjsonlitelabelinglatticelifecyclelistenvloomagrittrmarginaleffectsMASSMatrixmatrixStatsmgcvmimemunsellmvnfastmvtnormnleqslvnlmenloptrnumDerivopensslparallellypbapplypillarpkgbuildpkgconfigplyrposteriorpracmaprocessxpspurrrQuickJSRR6RColorBrewerRcppRcppArmadilloRcppEigenRcppParallelreshape2rlangrstanrstantoolsscalessmoothStanHeadersstatmodstringistringrsystensorAtexregtibbletidyselectutf8vctrsviridisLitewithrxtablezoo
Forecasting and forecast evaluation in mvgam
Rendered fromforecast_evaluation.Rmd
usingknitr::rmarkdown
on Sep 18 2024.Last update: 2024-09-06
Started: 2023-10-23
Formatting data for use in mvgam
Rendered fromdata_in_mvgam.Rmd
usingknitr::rmarkdown
on Sep 18 2024.Last update: 2024-09-06
Started: 2023-09-20
N-mixtures in mvgam
Rendered fromnmixtures.Rmd
usingknitr::rmarkdown
on Sep 18 2024.Last update: 2024-09-06
Started: 2024-01-29
Overview of the mvgam package
Rendered frommvgam_overview.Rmd
usingknitr::rmarkdown
on Sep 18 2024.Last update: 2024-09-06
Started: 2023-08-29
Shared latent states in mvgam
Rendered fromshared_states.Rmd
usingknitr::rmarkdown
on Sep 18 2024.Last update: 2024-09-06
Started: 2023-09-29
State-Space models in mvgam
Rendered fromtrend_formulas.Rmd
usingknitr::rmarkdown
on Sep 18 2024.Last update: 2024-09-06
Started: 2023-09-01
Time-varying effects in mvgam
Rendered fromtime_varying_effects.Rmd
usingknitr::rmarkdown
on Sep 18 2024.Last update: 2024-09-06
Started: 2023-10-14